PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06925
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 199aa    MW: 21601.6 Da    PI: 9.8301
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06925genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.71.2e-2863122159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dgy+WrKYGqK+ k++++pr+Y+rC++a +C+vkkkv+rsaed+ v++ tY g+H+h 
  EMT06925  63 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApSCHVKKKVQRSAEDKAVLVATYDGDHKHA 122
               58***************************99****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081124.6558124IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-2762124IPR003657WRKY domain
SuperFamilySSF1182902.09E-2462124IPR003657WRKY domain
SMARTSM007741.4E-3063123IPR003657WRKY domain
PfamPF031065.3E-2364121IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MDGQWMIGQT SLSLGLNVGG PTAECTSVHE PCNSKRVRAD ECKASRVSKL YVHADPSDLS  60
LVVKDGYQWR KYGQKVTKDN PCPRAYFRCS FAPSCHVKKK VQRSAEDKAV LVATYDGDHK  120
HAPPPKQPRA GGRKSGDAAA VRVSAAPVLG QQQRKQEPST AEQVDDRMNL VEQMAATLTR  180
DPGFKAALVS ALSSRIPVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-2048125175WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8273990.0KR827399.1 Triticum aestivum WRKY48 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627417.14e-64PREDICTED: probable WRKY transcription factor 40
SwissprotQ9SK337e-47WRK60_ARATH; Probable WRKY transcription factor 60
TrEMBLM8AYZ81e-147M8AYZ8_AEGTA; Putative WRKY transcription factor 60
STRINGMLOC_70190.11e-100(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP182238103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25000.14e-48WRKY DNA-binding protein 60